Responsible Genomic Data Sharing: Challenges and Approaches

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Xiaoqian Jiang (Associate Professor, Carnegie Mellon University, School of Computer Science) Haixu Tang (Professor, Department of Computer Science, Indiana University, Bloomington, IN, USA)

Responsible Genomic Data Sharing

Challenges and Approaches

Xiaoqian Jiang (Associate Professor, Carnegie Mellon University, School of Computer Science), Haixu Tang (Professor, Department of Computer Science, Indiana University, Bloomington, IN, USA)

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English

Academic Press Inc
17 March 2020

Genetics (non-medical); DNA & Genome

Responsible Genomic Data Sharing: Challenges and Approaches brings together international experts in genomics research, bioinformatics and digital security who analyze common challenges in genomic data sharing, privacy preserving technologies, and best practices for large-scale genomic data sharing. Practical case studies, including the Global Alliance for Genomics and Health, the Beacon Network, and the Matchmaker Exchange, are discussed in-depth, illuminating pathways forward for new genomic data sharing efforts across research and clinical practice, industry and academia.

Edited by: Xiaoqian Jiang (Associate Professor Carnegie Mellon University School of Computer Science), Haixu Tang (Professor, Department of Computer Science, Indiana University, Bloomington, IN, USA)
Imprint: Academic Press Inc
Country of Publication: United States
Dimensions: Height: 235mm, Width: 191mm,
Weight: 430g
ISBN: 9780128161975
ISBN 10: 0128161973
Pages: 210
Publication Date: 17 March 2020
Audience: Professional and scholarly , Undergraduate
Format: Paperback
Publisher's Status: Active

Section I: Privacy Challenges in Genomic Data Sharing 1. Criticality of Data Sharing in Genomic Research & Public views of genomic data sharing Gamze Gursoy 2. Genomic data access policy models Stephanie Dyke 3. Information leaks in aggregate genomic data, inference attacks Erman Ayday 4. Genealogical search using whole genome genotype profiles Yuan Wei, Ryan Lewis, Ardalan Naseri, Shaojie Zhang, Degui Zhi Section II: Privacy-Preserving Techniques for Responsible Genomic Data Sharing 5. Homomorphic encryption Kim Laine 6. Secure Multiparty Computing (MPC) Yan Huang 7. Game-Theoretic Approaches (for Genomic Privacy) Zhiyu Wan 8. Hardware (SGX) Somnath Chakrabarti, Thomas Knauth, Dmitrii Kuvaiskii, Michael Steiner and Mona Vij

Dr. Jiang is a Christopher Sarofim associate professor and center director for health security and phenotyping in the School of Biomedical Informatics (SBMI) at The University of Texas Health Science Center at Houston (UTHealth). Before joining UThealth, he was an associate professor with tenure in the Department of Biomedical Informatics (DBMI) at UCSD. He is an associate editor of BMC Medical Informatics and Decision Making and served as the editorial board member of Journal of American Medical Informatics Association. He works primarily in health data privacy and predictive models in biomedicine. He received CPRIT Rising Stars and UT Stars awards and best and distinguished paper awards from American Medical Informatics Association (AMIA) Joint Summits on Translational Science (2012, 2013, 2016). He is one of the organizers of the iDASH Genome Privacy Workshops, which was reported by Nature News and GenomeWeb. Dr. Haixu Tang is a Professor of Computer Science and the Director of Data Science Academic Programs in School of Informatics, Computing, and Engineering at Indiana University, Bloomington. His primary research interests include algorithmic statistical problems in genomics and proteomics, and has been working on genome privacy protection algorithms since 2008. He received the NSF CAREER Award in 2007, and the PETS award for his work in genome privacy in 2009. He is one of the organizers of the iDASH Genome Privacy Workshops.